Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917721.1_cds_XP_016467250.1_60012
CDS Infomation

[gene=LOC107789888] [db_xref=GeneID:107789888] [protein=dnaJ protein ERDJ3A-like] [protein_id=XP_016467250.1] [location=join(52916..53005,54302..54357,55803..55876,56246..56766,56843..57184,57313..57663,57779..58066)] [gbkey=CDS]
Sequence

ATGAAAACCCGACGAATTTCAATAGCCATTGTTCTATGCGCATCGCTCTTTGTTCTCAAC
ATTGAATCCAAAACGCTTGATCCTTATAAGGTGCTCGGAGTTGATAAAAATGCAAGTCAG
CGTGAGATCCAGAAAGCTTTTCACAAGCTCTCACTCCAATACCATCCAGACAAGAACAAA
AATAAGGGTGCACAAGAGAAATTTGCTGAGATTAATAACGCTTATGACATTCTGTCTGAT
GAGGAGAAGAGGAAGAACTATGACCTATACGGAGATGAGAAAGGAGCTCCTGGATTTGAC
GCTGGCGGTGCTGGAGATCATGGTGGATATACATACTTCACAAGTGGTGGACCAGGACAA
AGTGGGTTTAACTTCCGTCCAGGTGGTATGGGTGGACAAGGAGGTGCAAGGTCATTCTCT
TTTTCCTTTGGTGGTCCTGGCAGCCAAAGCTCTTTCGGATTTGGTTTAGATGATATATTT
TCCAACATGTTTGGGGGTGATATGGGAAGTGGGAATCAATTTGGGGGTTTTGGTGGCTTT
GGTGGTTCGGGCAGGTCTCAGTCTAGAACCAGGAACTCTGCTAAGAGCATCCCCTCCATA
AACTCGCAGATGTATAAGAAAGAAATATCTGATAAGGGAATGACTTGGCTGTTACTATCT
CATACATCTACGTCAAGAGGTATCCAACATTATGAATCTGTTATTGGAGAAGTCGCAAGC
TCACTGAAAGGGGCGATGAAGGTGGGAAGTCTTAACTGTGAAACTGATGCATCCTTTTGC
AAGGGCCTTGGCATATATCCCCGCAATGCACCAAGATTGTTTGTGTATTCATTAAAATCA
AGTGGAAATGGTGCTTTGGTGGAGTACAGTGATGATTTAGATGTGAAGAGGGTGAAAAGT
TTTTGCCAAGAACATCTTCCTGGATTCTCGAAGCGAATAGACTTGGACCACTTTGATTTT
GGTTCTCAGAGTATAGGAGGTTTACCTAAAGTGATGCTTCTCTCTACAAAGAAGGACACT
CCGGTTATTTGGCGTGCTCTTAGTGGCTTGTATCGGGATCGTTTTGTCTTCTATGATGCA
CAGGTTCGTGATGGTTCTGATCCTGCTGTCCAAAAGCTGGGAGTTAATGCTCTTCCTGCC
ATTGTTGGCTGGCTATCCAATGGGGAAAAGCATATAATTGAAACAGGAATTTCTGTAAAA
GATATAAAGTCTGCTATTCAAGATCTAAGTGGTTTACTGGATACTTTTGAAAAGAAAAAC
AAGAAGGCAGCTTCACAGAGTAAAAGAGAGCAGAGTGAACCAGAGGCTAAACAAGTACCA
CTAATTACAGGTTCTAATTTCAATGAAATTTGCGGGGAGAAAACTCCTGTGTGTGTGATT
GGTGTTTTCAGGTCATCTAAAACAAGGGAGAAGCTAGAAAAAGTTCTATTATCGGTTTCT
CAAAAATCATTATTAAGGCGACAGCATGTAGCCTCAGGCTCAAGGGATTCAGTTACCTAT
GCTCTTCTGGATGGAGCAAAGCAGCAGTCTTTCTTGAATGCGTTTGATAGATCAGGATAT
AAATCATCAGACAAGCTCTTGCTCGCCTACAAGCCGCGAAAGGGTAAGTTTGCAGTTTTT
GAGGGGGAAGTTACTACTGAAGAAGCAGAGAGTTTCATTAGCTCCGTTCTCAGTGGGGAT
GTACAATTTTCCAACACGAGACAGAAACCTATAGCAAAGTAG

Peptide Sequence

PEP ID

XP_016467250.1
PEP Infomation

PREDICTED: dnaJ protein ERDJ3A-like [Nicotiana tabacum]
Sequence

MKTRRISIAIVLCASLFVLNIESKTLDPYKVLGVDKNASQREIQKAFHKLSLQYHPDKNK
NKGAQEKFAEINNAYDILSDEEKRKNYDLYGDEKGAPGFDAGGAGDHGGYTYFTSGGPGQ
SGFNFRPGGMGGQGGARSFSFSFGGPGSQSSFGFGLDDIFSNMFGGDMGSGNQFGGFGGF
GGSGRSQSRTRNSAKSIPSINSQMYKKEISDKGMTWLLLSHTSTSRGIQHYESVIGEVAS
SLKGAMKVGSLNCETDASFCKGLGIYPRNAPRLFVYSLKSSGNGALVEYSDDLDVKRVKS
FCQEHLPGFSKRIDLDHFDFGSQSIGGLPKVMLLSTKKDTPVIWRALSGLYRDRFVFYDA
QVRDGSDPAVQKLGVNALPAIVGWLSNGEKHIIETGISVKDIKSAIQDLSGLLDTFEKKN
KKAASQSKREQSEPEAKQVPLITGSNFNEICGEKTPVCVIGVFRSSKTREKLEKVLLSVS
QKSLLRRQHVASGSRDSVTYALLDGAKQQSFLNAFDRSGYKSSDKLLLAYKPRKGKFAVF
EGEVTTEEAESFISSVLSGDVQFSNTRQKPIAK

Transcript Sequence

Gene sequence data has not been registered.